publications-of-the-year-2021.html - publications-of-the-year-2021.html

Publications of the year 2021

Reviewed publications

• Dokulil M.T., de Eyto E., Maberly S.C., May L., Weyhenmeyer G.A., Woolway R.I. (2021). Increasing maximum lake surface temperature under climate change, Climatic Change 165:56 doi.10.1007/s10584-021-03085-1
  
  
• Forster D., Qu Z., Pitsch G., Bruni E.P., Kammerlander B., Pröschold T., Sonntag B., Posch T., Stöck T. (2021). Lake ecosystem robustness and resilience inferred from a climate-stresses protistan plankton network. Microorganisms 9: 549, doi: 10.3390/microorganisms9030549
  
  

• Hoetzinger M., Pitt A., Huemer A., Hahn, M.W. (2021). Continental-scale gene flow prevents allopatric divergence of pelagic freshwater bacteria. Genome Biology and Evolution, 13:3, evab019, https://doi.org/10.1093/gbe/evab019
  
  

• Kuhl H., Guigen Y., Höhne C., Kreuz E., Du K., Klopp C., Lopez-Roques C., Yebra-Pimentel E.S., Ciorpac M., Gessner J., Holostenco D., Kleiner W., Kohlmann K., Lamatsch D.K., Prokopov D., Bestin A., Bonpunt E., Debeuf B., Haffray P., Morvezen R., Patrice P., Suciu R., Dirks R., Wuertz S., Kloas W., Schartl M., Stöck M. (2021). A 180 Myr-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes. Phil. Trans. R. Soc. B 376: 20200089. https://doi.org/10.1098/rstb.2020.0089
  
  
• Lu X., Gao Y., Weisse, T. (2021). Functional ecology of two contrasting freshwater ciliated protists in relation to temperature. J. Eukaryot. Microbiol. 68, e12823, https://doi.org/10.1111/jeu.12823.
  
  
• McElroy K. E., Müller S., Lamatsch D., Bankers L., Fields P.D., Jalinsky J.R., Sharbrough J., Boore J.L., Logsdon J.M., Neiman M. (in press).  Asexuality associated with marked genomic expansion of tandemly repeated rRNA and histone genes, Molecular Biology and Evolution, msab121, https://doi.org/10.1093/molbev/msab121
  
  

• Morón-Asensio R., Schuler D., Wiedlroither A., Offterdinger M., Kurmayer R. (2021). Differential Labeling of Chemically Modified Peptides and Lipids among Cyanobacteria Planktothrix and Microcystis. Microorganisms 9(8):1578. doi:10.3390/microorganisms9081578

• Pitt A., Schmidt J., Koll U., Hahn M.W. (2021). Aquiluna borgnonia gen. nov., sp. nov., a member of a Microbacteriaceae lineage of freshwater bacteria with small genome sizes. Int J Syst Evol Microbiol 71:5 https://doi.org/10.1099/ijsem.0.004825
  

  
  
• Pröschold T., Rieser D., Darienko T., Nachbaur L., Kammerlander B., Qian K., Pitsch G., Bruni P., Qu Z., Forster D., Rad-Mendez C., Posch T., Stoeck T., Sonntag B. (2021).  An integrative approach sheds new light onto the systematics and ecology of the widespread ciliate genus Coleps (Ciliophora, Prostomatea). Sci Rep 11: 5916, https://doi.org/10.1038/s41598-021-84265-y
  
  
• Qian K., Dokulil M., Lei W., Chen Y. (2021). The effects of water-level changes on periphytic algal assemblages in Poyang Lake. Fundam. Appl. Limnol. 194(4): 311-320. doi: 10.1127/fal/2020/1349
  
  
• Qu Z., Forster D., Bruni E., Frantal D., Kammerlander B., Nachbaur L., Pitsch G., Posch T., Pröschold T., Teubner K., Sonntag B., Stoeck T. (2021). Aquatic food webs in deep temperate lakes: key species establish through their autecological versatility. Molecular Ecology 30:1053-1071, doi.10.1111/mec.15776
  
  
• Reichelt N., Leger D., Daubert M., Ruffino P., Pröschold T., Darienko T. (online first). Epigenomic assessment during cryopreservation and physiology among various strains of Chromochloris zofingeiensis (Chlorophyceae) and their genetic variability revealed by AFLP and MS-AFLP. Journal of Applied Phycology. doi.10.1007/s10811-021-02468-2
  
  
• Rott E., Kurmayer R., Holzinger A., Sanders D.G. (2021). Contrasting endolithic habitats for cyanobacteria in
  spring calcites of the European Alps. Nova Hedwigia 112(1-2): 17-48. doi: 10.1127/nova_hedwigia/2021/0615  
  
  
• Schirpke U., Ebner M., Pritsch H., Fontana V., Kurmayer R. (2021). Quantifying Ecosystem Services of High Mountain Lakes across Different Socio-Ecological Contexts. Sustainability 13(11):6051. https://doi.org/10.3390/su13116051    
  
  
• Seppälä O., Çetin C., Cereghetti T., Feulner P.G.D., Adema C.M. (in press). Examining adaptive evolution of immune activity: opportunities provided by gastropods in the age of "omics". Philosophical Transactions B 376: 20200158, https://doi.org/10.1098/rstb.2020.0158
  
  
• Seppälä O., Walser J.C., Cereghetti T., Seppälä K., Saalo T., Adema C.M. (2021). Transcriptome profiling of Lymnaea stagnalis (Gastropoda) for ecoimmunological research. BMC Genomics 22: 144, https://doi.org/10.1186/s12864-021-07428-1
  
  
• Stelzer C.P., Pichler M., Hatheuer, A. (2021). Linking genome size variation to population phenotypic variation within the rotifer, Brachionus asplanchnoidis. Commun Biol 4:596, https://doi.org/10.1038/s42003-021-02131-z
  
  
• Stöck M., Dedukh D., Reifova R., Lamatsch D.K., Starostova Z., Janko K. (in press). Sex chromosomes in meiotic, hemiclonal, clonal and polyploid hybrids: along the ‘extended speciation continuum’ (submitted to Philosophical Transactions Royal Society B, themed issue “Challenging the paradigm in sex chromosome evolution: empirical and theoretical insights with a focus on vertebrates, Kratochvíl L, Stöck M, guest editors) - Stöck M., Dedukh D., Reifová R., Lamatsch D. K., Starostová Z., Janko K.(2021). Supplementary material from "Sex chromosomes in meiotic, hemiclonal, clonal and polyploid hybrid vertebrates: along the ‘extended speciation continuum'". The Royal Society. Collection. https://doi.org/10.6084/m9.figshare.c.5462630.v1  
  
  
• Thalinger B., Rieder A., Teuffenbach A., Pütz Y., Schwerte T., Wanzenböck J., Traugott M. (2021). The Effect of Activity, Energy Use, and Species Identity on Environmental DNA Shedding of Freshwater Fish. Front. Ecol. Evol. 9:623718, doi: 10.3389/fevo.2021.623718  
  
  
• Wanzenböck, J. (in press). Rearing and stocking of Coregonids: A comparison of aquaculture practices in Eurasia and North America, Advanc. Limnol. 66, Biology and Management of Coregonid Fishes – 2017, doi: 10.1127/adv_limnol/2021/0073
  
  
• Weisse T., Jezberova J., Moser M. (2021). Picoplankton feeding by the ciliate Vorticella similis in comparison to other peritrichs emphasizes their significance in the water purification process. Ecol. Ind. 121:106992, doi.org/10.1016/j.ecolind.2020.106992
  
  
• Weisse T., Lukić D., Lu X. (2021). Container volume may affect growth rates of ciliates and clearance rates of their microcrustacean predators in microcosm experiments, Journal of Plankton Research, fbab017, doi.10.1093/plankt/fbab017
  
  
• Woolway R.I., Sharma S., Weyhenmeyer G.A., Debolskiy A., Golub M., Mercado-Bettín D., Perroud M., Stepanenko V., Tan Z., Grant L., Ladwig R., Mesman J., Moore T.N., Shatwell T., Vanderkelen I., Austin J.A., DeGasperi C.L., Dokulil M., La Fuente S., Mackay E.B., Schladow S.G., Watanabe S., Marcé R., Pierson D.C., Thiery W., Jennings E. (2021). Phenological shifts in lake stratification under climate change, Nature Communications 12: 2318 doi. org/10.1038/s41467-021-22657-4
  
  

• Zajac N., Zoller S., Seppälä K., Moi D., Dessimoz C., Jokela J., Hartikainen H., Glover N., Gene Duplication and Gain in the Trematode Atriophallophorus winterbourni Contributes to Adaptation to Parasitism, Genome Biology and Evolution 13(3): evab010, https://doi.org/10.1093/gbe/evab010

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Books, Conference Proceedings, Reports, Book Reviews, Abstracts, Others

• Dokulil M.T., Kaiblinger C., (2021). Phytoplankton Productivity, In Encyclopedia of Inland Waters, Edited by: Gene E. Likens, Academic Press, (update of 2009), https://doi.org/10.1016/B978-012370626-3.00140-X
  
  
• Ibelings B., Kurmayer R, Azevedo S.M.F.O., Wood S.A., Chorus I., Welker M. (2021). Chapter 4: Understanding the occurrence of cyanobacteria and cyanotoxins, In: Chorus I., Welker M. (eds.). Toxic Cyanobacteria in Water: A Guide to Their Public Health Consequences, Monitoring and Management. CRC Press, 213-294.
  
  
• Padisák J., Chorus I., Welker M., Maršálek B., Kurmayer R. (2021). Chapter 13: Laboratory analyses of cyanobacteria and water chemistry, In: Chorus I., Welker M. (eds.). Toxic Cyanobacteria in Water: A Guide to Their Public Health Consequences, Monitoring and Management. CRC Press, 689-744.

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Diploma & Masters Theses 

• Purker, M. (2021). E.T. The Evaluation of Toxin-producing potential. A monitoring system for cyanobacteria in bathing waters via amplicon sequencing, MSc thesis University of Vienna, pp. 116 (supervision: Kurmayer R., Hufnagl P.)
  
  
• Sommer, F. (2021). Man-made mountain reservoirs: ciliates in human-influenced habitats, MSc thesis University of Innsbruck (supervision: Tartarotti B., Sonntag B.)
  
  
• Aigner, M. (2021). Fraßdruck von Fischlarven aus dem Coregonus lavaretus Artenkomplex auf Ciliaten, MSc thesis University of Innsbruck (supervision: Wanzenböck J., Sonntag B.)

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Dissertations

• Lu, X. (2021). Functional ecology and biodiversity of planktonic ciliates, PhD thesis University of Innsbruck (main supervision: Weisse, T.)

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