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SFB-F44 - Cell signaling in chronic CNS disorders

Other relevant publications of Alexander Hüttenhofer

2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005


Sonnleitner E, Gonzalez N, Sorger-Domenigg T, Heeb S, Richter AS, Backofen R, Williams P, Hüttenhofer A, Haas D, Bläsi U. (2011)
The small RNA PhrS stimulates synthesis of the Pseudomonas aeruginosa quinolone signal.
Mol Microbiol. 2011 May;80(4):868-85. doi: 10.1111/j.1365-2958.2011.07620.x. Epub 2011 Mar 22.

Rederstorff M, Hüttenhofer A. (2011)
cDNA library generation from ribonucleoprotein particles.
Nat Protoc. 2011 Feb;6(2):166-74. Epub 2011 Jan 27.

Rederstorff M, Hüttenhofer A. (2011)
Small non-coding RNAs in disease development and host-pathogen interactions.
Curr Opin Mol Ther. 2010 Dec;12(6):684-94. Review.

Kloss-Brandstätter A, Schäfer G, Erhart G, Hüttenhofer A, Coassin S, Seifarth C, Summerer M, Bektic J, Klocker H, Kronenberg F. (2011)
Somatic mutations throughout the entire mitochondrial genome are associated with elevated PSA levels in prostate cancer patients.
Am J Hum Genet. 2010 Dec 10;87(6):802-12.

Hutzinger R, Mrázek J, Vorwerk S, Hüttenhofer A. (2011)
NcRNA-microchip analysis: a novel approach to identify differential expression of noncoding RNAs.
RNA Biol. 2010 Sep-Oct;7(5):586-95. Epub 2010 Sep 1.


Rederstorff, M., Bernhart, S. H., Tanzer, A. Zywicki, M, Perfler, K, Lukasser, M., Hofacker, I. L.  and Hüttenhofer A. (2010)
RNPomics: an analysis of the ncRNA transcriptomeby cDNA library generation from ribonucleo-protein particles.
Nucleic Acids Res., 38, e113

Soeno Y., Taya Y., Stasyk T., Huber L.A., Aoba T. and Hüttenhofer A. (2010)
Identification of novel ribonucleo-protein complexes from the brain-specific snoRNA
MBII-52, RNA, 16, 1293-1300.


Ploner , A., Ploner, C., Lukasser. M., Niederegger, H. and Hüttenhofer, A. (2009)
Methodological obstacles in knocking down small noncoding RNAs.
RNA, 15, 1797-1804.

Nandy, C., Mrázek, J., Stoiber, H., Grässer, F.A., Hüttenhofer, A. and Polacek, N. (2009)
Epstein-Barr Virus-Induced Expression of a Novel Human Vault RNA.
J. Mol. Biol., 388, 776–784.

Jöchl, C., Loh, E., Ploner, A., Haas, H. and Hüttenhofer, A. (2009)
Development-dependent scavenging of nucleic acids in the filamentous fungus Aspergillus fumigatus.
RNA Biology, 6, 179-186.

Hutzinger, R., Feederle, R., Mrazek. J., Schiefermeier. N., Balwierz. P.J., Zavolan, M., Polacek, N., Delecluse, H.J. and Hüttenhofer, A. (2009)
Expression and processing of a small nucleolar RNA from the Epstein-Barr virus genome.
PLOS Pathogens, 5, e1000547.


Rymarquis, L. A., Kastenmayer, J. P., Hüttenhofer, A. and Green, P.J. (2008)
Diamonds in the rough: mRNA-like non-coding RNAs.
Trends in Plant Sci., 13, 329-334.

Jöchl, C., Rederstorff, M., Hertel J, Stadler, P.F., Hofacker, I., Schrettl, M. , Haas, H. and Huttenhofer, A. (2008)
Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein synthesis.
Nucleic Acids Res., 36, 2677-2689.

Madej, M., Niemann, M., Hüttenhofer, A. and Göringer, H. U. (2008)
Identification of novel guide RNAs from the mitochondria of Trypanosoma brucei.
RNA Biology, 5, 84-91.

Sonnleitner, E., Sorger-Domenigg. Th., Madej, M. J., Findeiss, S., Hackermüller, J., Hüttenhofer, A., Stadler, P.F., Bläsi, U. and Moll, I. (2008)
Detection of small RNAs in Pseudomonas aeruginosa by RNomics and structure-based bioinformatic tools.
Microbiology, 154, 3175–3187.


Monika J. M.,  Alfonzo, J. D. and Alexander Hüttenhofer (2007)
Small ncRNA transcriptome analysis from kinetoplast mitochondria of Leishmania tarentolae.
Nucleic Acids Res., 35,  1544-1554.

Mrazek, J., Kreutmayer, S. B., Grässer, F. A., Polacek, N. and Alexander Hüttenhofer, (2007)
Subtractive hybridization identifies novel differentially expressed ncRNA species in EBV-infected human B cells.
Nucleic Acids Res., 35, e73.

Winter, F., Edaye, S., Hüttenhofer, A. and Brunel, C. (2007)
Anopheles gambiae  miRNAs as actors of defence reaction against Plasmodium invasion.
Nucleic Acids Res., 35, 6953-6962.


Lung, B., Zemann, A., Madej, MJ., Schuelke, M., Techritz, S., Ruf, S., Bock, R. and Huttenhofer, A. (2006)
Identification of small non-coding RNAs from mitochondria and chloroplasts.
Nucleic Acids Res., 34,  3842-3852.

Hüttenhofer, A. and Schattner, P. (2006)
The principles of guiding by RNA: chimeric RNA-protein enzymes.
Nat. Rev. Genetics, 7, 475-482.

Hüttenhofer, A. and Vogel, J. (2006)
Experimental approaches to identify non-coding RNAs.
Nucleic Acids Res., 34, 635-646.


Hüttenhofer, A., Schattner, P. and Polacek, N. (2005)
Non-coding RNAs: hope or hype?
Trends in Genet., 21, 289-297.

Tang, T.-H., Polacek, N., Zywicki, M., Huber, H., Brugger, K., Garrett, R., Bachellerie, J.-P. and Hüttenhofer, A. (2005)
Identification of novel non-coding RNAs as potential antisense regulators in the archaeon Sulfolobus solfataricus.
Mol. Microbiol., 55, 469-481.

Erlacher, M. D., Lang, K., Shankaran, N., Wotzel, B., Hüttenhofer, A., Micura, R., Mankin, A. and Polacek, N. (2005)
Chemical engeneering of the peptidyl transferase center reveals an important role of the 2‘-hydroxyl group of A2451.
Nucleic Acids Res., 33, 1618-1627.

Willkomm, D., Minnerup, J., Hüttenhofer, A. and Hartmann, R. (2005)
Experimental RNomics in Aquifex aeolicus: Identification of small non-coding RNAs and the putative 6S RNA homolog.
Nucleic Acids Res., 33, 1949-1960.

Vitali, P., Basyuk, E., Le Meur, E., Bertrand, E., Muscatelli, F., Cavaillé, J., and Hüttenhofer, A. (2005).
ADAR2-mediated editing of RNA substrates in the nucleolus is inhibited by small nucleolar C/D RNAs.
J. Cell Biology, 169, 745-753.

Washietl, S., Hofacker, I., Lukasser, M., Hüttenhofer, A. and Stadler, P. F. (2005)
Nature Biotechnology, 23, 1383-1390.